[Pytorch] COVID-19 Single-cell Differential Analysis with Explainable Machine Learning Models

 

In this project, We

• Built a pipeline upon Scanpy to fast exploration to COVID-19 single-cell sequence datasets.
• Supported scRNA-seq preprocess, dimension-reduction visualization (Umap & Tsne), classification and differential gene extraction functions.

Below are our representation slides. Code and paper are not open sources at the moment.